Gene: Zm00001eb025020
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb025020
- Transcript Identifier Zm00001eb025020_T002
- Gene Type Coding gene
- Location 1 : 105261856-105267147 : positive
Gene Family Information
- ID HOM05D000329
- #Genes/#Species 1418/100
- Phylogenetic origin
- ID ORTHO05D002813
- #Genes/#Species 260/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Zm00001eb025020_T002
- pid Zm00001eb025020_P002
- uniprot A0A317Y202
- uniprot A0A1D6K9X2
- uniprot A0A317Y1Q8
- uniprot A0A1D6K9Y2
- uniprot A0A1D6K9X1
- uniprot A0A1D6K9Y5
- uniprot A0A1D6K9X3
- uniprot A0A1D6K9Y1
- V4_identifier Zm00001d030108
Descriptions
- Description Zm00001e002479
- Description Lysine-specific demethylase REF6
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032259 | IEA | GOA Database | methylation | |
| GO:0034721 | IEA | GOA Database | histone H3-K4 demethylation, trimethyl-H3-K4-specific | |
| GO:0016577 | IEA | GOA Database | histone demethylation | |
| GO:0006338 | IBA | GOA Database | chromatin remodeling | |
| GO:0045815 | ISO | PLAZA Integrative Orthology | positive regulation of gene expression, epigenetic | Os10g0577600 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT5G46910 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT5G46910 |
| GO:0048439 | ISO | PLAZA Integrative Orthology | flower morphogenesis | Os10g0577600 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008168 | IEA | GOA Database | methyltransferase activity | |
| GO:0032452 | IBA | GOA Database | histone demethylase activity | |
| GO:0034647 | IBA | GOA Database | histone demethylase activity (H3-trimethyl-K4 specific) | |
| GO:0032454 | ISO | PLAZA Integrative Orthology | histone demethylase activity (H3-K9 specific) | Os10g0577600 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA | GOA Database | nucleus | |
| GO:0000792 | ISO | PLAZA Integrative Orthology | heterochromatin | Os10g0577600 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.3.3.8.5 | Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM8) |