Gene: Zm00001eb017780

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb017780
  • Transcript Identifier Zm00001eb017780_T001
  • Gene Type Coding gene
  • Location 1 : 63179832-63184075 : positive

Gene Family Information

  • ID HOM05D001283
  • #Genes/#Species 488/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb017780_T001
  • pid Zm00001eb017780_P001
  • uniprot B4FP89
  • uniprot A0A317Y5V4
  • uniprot A0A1D6K3W7
  • uniprot B6U3L0
  • uniprot A0A1D6K3W8
  • uniprot C0PI47
  • uniprot A0A1D6K3W5
  • uniprot A0A1D6K3W4
  • uniprot M1H967
  • entrez 100272550
  • refseq NP_001140489.1
  • refseq XM_008668481.1
  • refseq XP_008666703.1
  • refseq NM_001147017.1
  • V4_identifier Zm00001d029256

Descriptions

  • Description Zm00001e001755
  • Description Serine/arginine-rich SC35-like splicing factor SCL28
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
GOA DatabasemRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IBA
IEA
GOA DatabaseRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G18810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
IBA
IEA
GOA Databasenuclear speck
GO:0005634
IEA
GOA Databasenucleus
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.2.6.2 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (SCL28/30/33)