Gene: Thhalv10021499m.g

General Information

Structural Information

  • Species Eutrema salsugineum
  • Gene Identifier Thhalv10021499m.g
  • Transcript Identifier Thhalv10021499m
  • Gene Type Coding gene
  • Location scaffold_13 : 4915611-4916434 : positive

Gene Family Information

  • ID HOM05D000390
  • #Genes/#Species 1264/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thhalv10021499m.g.v1.0
  • pacid 20183133

Descriptions

  • Description PTHR10315:SF45 - E3 UBIQUITIN-PROTEIN LIGASE
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0007275
IEA
InterPromulticellular organism development
GO:1902584
ISO
PLAZA Integrative Orthologypositive regulation of response to water deprivation AT3G13672
GO:2000785
ISO
PLAZA Integrative Orthologyregulation of autophagosome assembly AT3G13672
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT3G13672

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT3G13672

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G13672

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008974 TRAF-like
IPR018121 Seven-in-absentia protein, TRAF-like domain
Mapman id Description
19.2.2.1.4.3.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (SINA)