Gene: Thhalv10018611m.g

General Information

Structural Information

Species Eutrema salsugineum
Gene Identifier Thhalv10018611m.g
Transcript Identifier Thhalv10018611m
Gene Type Coding gene
Location scaffold_9 : 201110-202468 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002649
#Genes/#Species 259/90
Phylogenetic origin

ID ORTHO05D002838
#Genes/#Species 258/91
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Thhalv10018611m.g.v1.0
pacid 20191984

Descriptions

Short descriptions
Ortholog descriptions

Description PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3)

Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT1G80270

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005739	ISO	PLAZA Integrative Orthology	mitochondrion	AT1G80270
GO:0009941	ISO	PLAZA Integrative Orthology	chloroplast envelope	AT1G80270

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR033443	Pentacotripeptide-repeat region of PRORP
IPR002885	Pentatricopeptide repeat
IPR011990	Tetratricopeptide-like helical domain superfamily

Mapman id	Description
16.11.3.3.4.20	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (POCO)