Gene: Thecc.10G086100
General Information
Structural Information
- Species Theobroma cacao
- Gene Identifier Thecc.10G086100
- Transcript Identifier Thecc.10G086100.1
- Gene Type Coding gene
- Location Chromosome_10 : 5265200-5266810 : positive
Gene Family Information
- ID HOM05D004376
- #Genes/#Species 163/98
- Phylogenetic origin
- ID ORTHO05D005304
- #Genes/#Species 160/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Thecc.10G086100.v2.1
- pacid 42025966
- ancestorIdentifier Thecc1EG043318.CGDv1.1
Descriptions
- Description Pseudouridine synthase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001522 | IEA | InterPro | pseudouridine synthesis | |
| GO:0009451 | IEA | InterPro | RNA modification | |
| GO:0031119 | IEA | InterPro | tRNA pseudouridine synthesis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0009982 | IEA | InterPro | pseudouridine synthase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G20370 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001406 | Pseudouridine synthase I, TruA |
| IPR020097 | Pseudouridine synthase I, TruA, alpha/beta domain |
| IPR020103 | Pseudouridine synthase, catalytic domain superfamily |
| IPR020095 | Pseudouridine synthase I, TruA, C-terminal |
| IPR041708 | Pseudouridine synthase PUS1/ PUS2-like |
| IPR020094 | Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal |
| Mapman id | Description |
|---|---|
| 16.5.3.1 | RNA processing.RNA modification.pseudouridylation.tRNA pseudouridine synthase (TruA) |