Gene: Thecc.09G151800

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.09G151800
  • Transcript Identifier Thecc.09G151800.1
  • Gene Type Coding gene
  • Location Chromosome_9 : 9078761-9082509 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.09G151800.v2.1
  • pacid 42008753
  • ancestorIdentifier Thecc1EG046928.CGDv1.1
  • ancestorIdentifier Thecc1EG046928t1.CGDv1.1

Descriptions

  • Description Pentatricopeptide repeat (PPR) superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080156
ISO
PLAZA Integrative Orthologymitochondrial mRNA modification AT4G30700
GO:0000963
ISO
PLAZA Integrative Orthologymitochondrial RNA processing AT4G30700
GO:0016554
ISO
PLAZA Integrative Orthologycytidine to uridine editing AT4G30700

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G30700
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G30700

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR032867 DYW domain
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.11.3.3.4.22 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF29)