Gene: Thecc.01G161900
General Information
Structural Information
- Species Theobroma cacao
- Gene Identifier Thecc.01G161900
- Transcript Identifier Thecc.01G161900.1
- Gene Type Coding gene
- Location Chromosome_1 : 10004440-10006294 : positive
Gene Family Information
- ID HOM05D001201
- #Genes/#Species 520/96
- Phylogenetic origin
- ID ORTHO05D001100
- #Genes/#Species 487/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Thecc.01G161900.v2.1
- pacid 42013741
- ancestorIdentifier Thecc1EG001867.CGDv1.1
- ancestorIdentifier Thecc1EG001867t1.CGDv1.1
Descriptions
- Description DNA N-glycosylase/DNA-(Apurinic or apyrimidinic site) lyase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0080111 | IEA | InterPro | DNA demethylation | |
| GO:0006281 | ISO | PLAZA Homology (enrichment) | DNA repair | HOM05D001201 |
| GO:0006284 | ISO | PLAZA Homology (enrichment) | base-excision repair | HOM05D001201 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019104 | IEA | InterPro | DNA N-glycosylase activity | |
| GO:0035514 | IEA | InterPro | DNA demethylase activity | |
| GO:0003824 | ISO | PLAZA Homology (enrichment) | catalytic activity | HOM05D001201 |
| GO:0051539 | ISO | PLAZA Homology (enrichment) | 4 iron, 4 sulfur cluster binding | HOM05D001201 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044811 | DNA glycosylase, plant |
| Mapman id | Description |
|---|---|
| 35.2 | not assigned.not annotate |