Gene: TWI79G0111

General Information

Structural Information

Species Tripterygium wilfordii
Gene Identifier TWI79G0111
Transcript Identifier TWI79G0111.01
Gene Type Coding gene
Location NC_052238.1 : 176459-178835 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002411
#Genes/#Species 281/98
Phylogenetic origin

ID ORTHO05D002564
#Genes/#Species 279/98
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid rna-XM_038850052.1
id gene-LOC120001640
Dbxref GeneID:120001640
Dbxref GeneID:120001640,Genbank:XM_038850052.1
pid XP_038705980.1

Descriptions

Short descriptions
Ortholog descriptions

product U2 small nuclear ribonucleoprotein B'' 2-like

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009631	ISO	PLAZA Integrative Orthology	cold acclimation	AT1G06960
GO:0000354	ISO	PLAZA Integrative Orthology	cis assembly of pre-catalytic spliceosome	AT2G30260

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT2G30260
GO:0015030	ISO	PLAZA Integrative Orthology	Cajal body	AT2G30260
GO:0005686	ISO	PLAZA Integrative Orthology	U2 snRNP	AT2G30260
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT2G30260
GO:0005654	ISO	PLAZA Integrative Orthology	nucleoplasm	AT2G30260

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR035979	RNA-binding domain superfamily
IPR000504	RNA recognition motif domain
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily

Mapman id	Description
16.2.1.2.2	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).protein factor (U2B)