Gene: TWI34G0038

General Information

Structural Information

Species Tripterygium wilfordii
Gene Identifier TWI34G0038
Transcript Identifier TWI34G0038.01
Gene Type Coding gene
Location NC_052235.1 : 5411097-5417647 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001696
#Genes/#Species 382/99
Phylogenetic origin

ID ORTHO05D001746
#Genes/#Species 360/99
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

tid rna-XM_038844037.1
id gene-LOC119997181
Dbxref GeneID:119997181
Dbxref GeneID:119997181,Genbank:XM_038844037.1
pid XP_038699965.1

Descriptions

Short descriptions
Ortholog descriptions

product protein PAT1 homolog 1-like, transcript variant X2

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000290	IEA	InterPro	deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0019827	ISO	PLAZA Integrative Orthology	stem cell population maintenance	AT3G22270
GO:0045087	ISO	PLAZA Integrative Orthology	innate immune response	AT1G79090

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G22270
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT1G79090

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G22270
GO:0000932	ISO	PLAZA Integrative Orthology	P-body	AT1G79090
GO:0005783	ISO	PLAZA Integrative Orthology	endoplasmic reticulum	AT3G22270

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR039900	Pat1-like

Mapman id	Description
16.4.2.5	RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA decay factor (PAT1)