Gene: TPR.G9970

General Information

Structural Information

Species Trifolium pratense
Gene Identifier TPR.G9970
Transcript Identifier TPR.T10307
Gene Type Coding gene
Location Tp57577_TGAC_v2_LG1 : 13649388-13651784 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000001
#Genes/#Species 35287/100
Phylogenetic origin

ID ORTHO05D000003
#Genes/#Species 15137/100
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Tp57577_TGAC_v2_mRNA10307.v2
id Tp57577_TGAC_v2_gene9970.v2
pacid 35978401

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009793	ISO	PLAZA Integrative Orthology	embryo development ending in seed dormancy	AT3G49170
GO:0016556	ISO	PLAZA Integrative Orthology	mRNA modification	AT1G11290

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0004519	ISO	PLAZA Integrative Orthology	endonuclease activity	AT1G11290
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT1G11290

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT1G11290

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR002885	Pentatricopeptide repeat
IPR032867	DYW domain

Mapman id	Description
16.11.3.3.4.45	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (CRR22)