Gene: TPR.G5325
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G5325
- Transcript Identifier TPR.T5507
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG2 : 23394911-23396216 : positive
Gene Family Information
- ID HOM05D000066
- #Genes/#Species 3967/96
- Phylogenetic origin
- ID ORTHO05D000055
- #Genes/#Species 2700/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA5507.v2
- id Tp57577_TGAC_v2_gene5325.v2
- pacid 35970201
- uniprot A0A2K3MBZ3
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0071669 | ISO | PLAZA Integrative Orthology | plant-type cell wall organization or biogenesis | AT4G30270 |
| GO:0007568 | ISO | PLAZA Integrative Orthology | aging | AT4G30270 |
| GO:0009740 | ISO | PLAZA Integrative Orthology | gibberellic acid mediated signaling pathway | AT4G30270 |
| GO:0009741 | ISO | PLAZA Integrative Orthology | response to brassinosteroid | AT4G30270 |
| GO:0009739 | ISO | PLAZA Integrative Orthology | response to gibberellin | AT4G30270 |
| GO:0009828 | ISO | PLAZA Integrative Orthology | plant-type cell wall loosening | AT4G30270 |
| GO:0006073 | IEA | GOA Database | cellular glucan metabolic process | |
| GO:0006073 | IEA | InterPro | cellular glucan metabolic process | |
| GO:0042546 | IEA | InterPro | cell wall biogenesis | |
| GO:0010411 | IEA | InterPro | xyloglucan metabolic process | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016762 | IEA | GOA Database | xyloglucan:xyloglucosyl transferase activity | |
| GO:0016762 | IEA | InterPro | xyloglucan:xyloglucosyl transferase activity | |
| GO:0033946 | ISO | PLAZA Integrative Orthology | xyloglucan-specific endo-beta-1,4-glucanase activity | AT5G57530 |
| GO:0004553 | IEA | GOA Database | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0016787 | IEA | GOA Database | hydrolase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G30270 |
| GO:0009505 | ISO | PLAZA Integrative Orthology | plant-type cell wall | AT4G30270 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT4G30270 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G30270 |
| GO:0048046 | IEA | GOA Database | apoplast | |
| GO:0048046 | IEA | InterPro | apoplast | |
| GO:0005618 | IEA | GOA Database | cell wall | |
| GO:0005618 | IEA | InterPro | cell wall |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 50.2.4 | Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase |