Gene: TPR.G40000
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G40000
- Transcript Identifier TPR.T41349
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_scaf_6906 : 1024-2305 : negative
Gene Family Information
- ID HOM05D002050
- #Genes/#Species 324/94
- Phylogenetic origin
- ID ORTHO05D001949
- #Genes/#Species 333/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA41349.v2
- id Tp57577_TGAC_v2_gene40000.v2
- pacid 35960274
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0010015 | ISO | PLAZA Integrative Orthology | root morphogenesis | AT3G25520 |
GO:0006913 | ISO | PLAZA Integrative Orthology | nucleocytoplasmic transport | AT3G25520 |
GO:0051301 | ISO | PLAZA Integrative Orthology | cell division | AT5G39740 |
GO:0009965 | ISO | PLAZA Integrative Orthology | leaf morphogenesis | AT5G39740 |
GO:0009955 | ISO | PLAZA Integrative Orthology | adaxial/abaxial pattern specification | AT5G39740 |
GO:0006412 | IEA | InterPro | translation |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G39740 |
GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
GO:0008097 | IEA | InterPro | 5S rRNA binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G39740 |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G39740 |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G25520 |
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G25520 |
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G25520 |
GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT3G25520 |
GO:0005654 | ISO | PLAZA Integrative Orthology | nucleoplasm | AT3G25520 |
GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT5G39740 |
GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G39740 |
GO:0022625 | ISO | PLAZA Integrative Orthology | cytosolic large ribosomal subunit | AT5G39740 |
GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT5G39740 |
GO:0005840 | IEA | InterPro | ribosome |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
17.1.2.1.3 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL5 |