Gene: TPR.G39904

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G39904
  • Transcript Identifier TPR.T41253
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_3993 : 1517-2841 : positive

Gene Family Information

  • ID HOM05D000621
  • #Genes/#Species 920/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA41253.v2
  • id Tp57577_TGAC_v2_gene39904.v2
  • pacid 35962126

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0036123
ISO
PLAZA Integrative Orthologyhistone H3-K9 dimethylation AT1G09320
GO:0044030
ISO
PLAZA Integrative Orthologyregulation of DNA methylation AT1G09320
GO:0006346
ISO
PLAZA Integrative OrthologyDNA methylation-dependent heterochromatin assembly AT1G09320

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT1G26540
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G62300
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT1G09320
GO:0035064
ISO
PLAZA Integrative Orthologymethylated histone binding AT1G09320

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT2G47220
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G09320
GO:0000792
ISO
PLAZA Integrative Orthologyheterochromatin AT1G09320
GO:0000775
ISO
PLAZA Integrative Orthologychromosome, centromeric region AT1G09320
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G26540

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014002 Agenet domain, plant type
IPR008395 Agenet-like domain
Mapman id Description
12.3.3.9.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.histone methylation reader activities.histone H3K9 methylation reader (AGDP1)