Gene: TPR.G39559

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G39559
  • Transcript Identifier TPR.T40902
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_13913 : 672-1565 : positive

Gene Family Information

  • ID HOM05D000509
  • #Genes/#Species 1053/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA40902.v2
  • id Tp57577_TGAC_v2_gene39559.v2
  • pacid 35953432
  • uniprot A0A2K3LT73

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045492
IEA
GOA Databasexylan biosynthetic process
GO:0045492
IEA
InterProxylan biosynthetic process
GO:0032259
IEA
GOA Databasemethylation
GO:0005976
ISO
PLAZA Integrative Orthologypolysaccharide metabolic process AT1G33800
GO:0045491
ISO
PLAZA Integrative Orthologyxylan metabolic process AT1G09610
GO:0009808
ISO
PLAZA Integrative Orthologylignin metabolic process AT1G33800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016740
IEA
GOA Databasetransferase activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0030775
ISO
PLAZA Integrative Orthologyglucuronoxylan 4-O-methyltransferase activity AT1G09610

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT1G09610

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006514 IRX15/IRX15L/IGXM
IPR021148 Polysaccharide biosynthesis domain
Mapman id Description
21.2.2.2.3 Cell wall organisation.hemicellulose.xylan.modification and degradation.glucuronoxylan 4-O-methyltransferase