Gene: TPR.G39045

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G39045
  • Transcript Identifier TPR.T40374
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG6 : 18748358-18763730 : positive

Gene Family Information

  • ID HOM05D001240
  • #Genes/#Species 503/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA40374.v2
  • id Tp57577_TGAC_v2_gene39045.v2
  • pacid 35976381
  • uniprot A0A2K3N090

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051301
IEA
GOA Databasecell division
GO:0048505
ISO
PLAZA Integrative Orthologyregulation of timing of cell differentiation AT2G44950
GO:0033523
IEA
GOA Databasehistone H2B ubiquitination
GO:0010389
IEA
GOA Databaseregulation of G2/M transition of mitotic cell cycle
GO:0006513
IEA
GOA Databaseprotein monoubiquitination
GO:0010228
IEA
GOA Databasevegetative to reproductive phase transition of meristem
GO:0010162
IEA
GOA Databaseseed dormancy process
GO:0009965
IEA
GOA Databaseleaf morphogenesis
GO:0051781
IEA
GOA Databasepositive regulation of cell division
GO:0050832
IEA
GOA Databasedefense response to fungus
GO:0045087
IEA
GOA Databaseinnate immune response
GO:0006325
IEA
GOA Databasechromatin organization
GO:0010390
IEA
GOA Databasehistone monoubiquitination
GO:0010390
IEA
InterProhistone monoubiquitination
GO:0016567
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G44950
GO:0042802
IEA
GOA Databaseidentical protein binding
GO:0042803
IEA
GOA Databaseprotein homodimerization activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR018957 Zinc finger, C3HC4 RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR013956 E3 ubiquitin ligase Bre1
Mapman id Description
19.2.2.1.4.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase