Gene: TPR.G38454

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G38454
  • Transcript Identifier TPR.T39753
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG5 : 11313373-11323544 : positive

Gene Family Information

  • ID HOM05D004863
  • #Genes/#Species 152/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA39753.v2
  • id Tp57577_TGAC_v2_gene38454.v2
  • pacid 35983780
  • uniprot A0A2K3L741

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007062
IEA
GOA Databasesister chromatid cohesion
GO:0007062
IEA
InterProsister chromatid cohesion
GO:0000723
IEA
InterProtelomere maintenance
GO:0006281
IEA
InterProDNA repair
GO:0051455
ISO
PLAZA Integrative Orthologymonopolar spindle attachment to meiosis I kinetochore AT5G05490
GO:0010032
ISO
PLAZA Integrative Orthologymeiotic chromosome condensation AT5G05490
GO:0051276
ISO
PLAZA Integrative Orthologychromosome organization AT5G05490
GO:0051754
ISO
PLAZA Integrative Orthologymeiotic sister chromatid cohesion, centromeric AT5G05490

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003678
IEA
InterProDNA helicase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008278
IEA
GOA Databasecohesin complex
GO:0008278
IEA
InterProcohesin complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005694
ISO
PLAZA Integrative Orthologychromosome AT5G05490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006910 Rad21/Rec8-like protein, N-terminal
IPR039781 Rad21/Rec8-like protein
IPR006909 Rad21/Rec8-like protein, C-terminal, eukaryotic
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR023093 ScpA-like, C-terminal
IPR036390 Winged helix DNA-binding domain superfamily
IPR025476 Helitron helicase-like domain
IPR010285 DNA helicase Pif1-like
Mapman id Description
13.3.4.1.4 Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.meiotic-specific Kleisin-type component SYN1