Gene: TPR.G3556

General Information

Structural Information

Species Trifolium pratense
Gene Identifier TPR.G3556
Transcript Identifier TPR.T3657
Gene Type Coding gene
Location Tp57577_TGAC_v2_LG7 : 7483492-7486318 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000560
#Genes/#Species 984/100
Phylogenetic origin

ID ORTHO05D000417
#Genes/#Species 959/100
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Tp57577_TGAC_v2_mRNA3657.v2
id Tp57577_TGAC_v2_gene3556.v2
pacid 35956504
uniprot A0A2K3N6Q2

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0055085	IEA	GOA Database	transmembrane transport
GO:0055085	IEA	InterPro	transmembrane transport
GO:0050982	ISO	PLAZA Integrative Orthology	detection of mechanical stimulus	AT5G12080
GO:0010150	ISO	PLAZA Integrative Orthology	leaf senescence	AT5G12080
GO:0097468	ISO	PLAZA Integrative Orthology	programmed cell death in response to reactive oxygen species	AT5G12080
GO:0080167	ISO	PLAZA Integrative Orthology	response to karrikin	AT5G19520
GO:0006820	ISO	PLAZA Integrative Orthology	anion transport	AT5G12080

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008381	ISO	PLAZA Integrative Orthology	mechanosensitive ion channel activity	AT5G12080

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016020	IEA	GOA Database	membrane
GO:0016020	IEA	InterPro	membrane
GO:0005886	IEA	GOA Database	plasma membrane
GO:0016021	IEA	GOA Database	integral component of membrane
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT5G19520

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR016688	Mechanosensitive ion channel MscS-like, plants/fungi
IPR006685	Mechanosensitive ion channel MscS
IPR010920	LSM domain superfamily
IPR023408	Mechanosensitive ion channel MscS domain superfamily

Mapman id	Description
24.3.5	Solute transport.channels.mechanosensitive ion channel (MSL)