Gene: AT4G21030
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G21030
- Transcript Identifier AT4G21030.1
- Gene Type Coding gene
- Location Chr4 : 11231414-11231998 : positive
Gene Family Information
- ID HOM05D000110
- #Genes/#Species 3051/96
- Phylogenetic origin
- ID ORTHO05D000024
- #Genes/#Species 3751/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT4G21030.1
- symbol ATDOF4.2
- uniprot Q9SUB1
Descriptions
- Description Dof-type zinc finger domain-containing protein
- Computational description ATDOF4.2; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger domain-containing protein (TAIR:AT4G21050.1); Has 1054 Blast hits to 1049 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1049; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | TAS | Gene Ontology | regulation of transcription, DNA-templated | 1 |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0010214 | IMP | Gene Ontology | seed coat development | 2 |
| GO:0045893 | IDA | Gene Ontology | positive regulation of transcription, DNA-templated | 2 |
| GO:0048359 | IMP | Gene Ontology | mucilage metabolic process involved in seed coat development | 2 |
| GO:0048825 | IMP | Gene Ontology | cotyledon development | 2 |
| GO:2000032 | IMP | Gene Ontology | regulation of secondary shoot formation | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 1 |
| GO:0043565 | IDA | Gene Ontology | sequence-specific DNA binding | 2 |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003851 | Zinc finger, Dof-type |
| Mapman id | Description |
|---|---|
| 15.5.1.5 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF) |