Gene: TPR.G25565
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G25565
- Transcript Identifier TPR.T26441
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG3 : 22108832-22112735 : positive
Gene Family Information
- ID HOM05D000165
- #Genes/#Species 2272/97
- Phylogenetic origin
- ID ORTHO05D005214
- #Genes/#Species 162/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA26441.v2
- id Tp57577_TGAC_v2_gene25565.v2
- pacid 35990668
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042545 | IEA | InterPro | cell wall modification | |
| GO:0050829 | ISO | PLAZA Integrative Orthology | defense response to Gram-negative bacterium | AT3G29090 |
| GO:0045488 | ISO | PLAZA Integrative Orthology | pectin metabolic process | AT3G29090 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030599 | IEA | InterPro | pectinesterase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G29090 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.3.1.2.1 | Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase |