Gene: AT3G29090

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G29090
  • Transcript Identifier AT3G29090.1
  • Gene Type Coding gene
  • Location Chr3 : 11073804-11075335 : positive

Gene Family Information

  • ID HOM05D000165
  • #Genes/#Species 2272/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G29090.1
  • symbol PME31
  • Alias ATPME31,A. THALIANA PECTIN METHYLESTERASE 31
  • uniprot Q9LVQ0

Descriptions

  • Description pectin methylesterase 31
  • Computational description pectin methylesterase 31 (PME31); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: pectin metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2575 Blast hits to 2532 proteins in 376 species: Archae - 8; Bacteria - 733; Metazoa - 1; Fungi - 195; Plants - 1611; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042545
IEA
Gene Ontologycell wall modification
GO:0042545
IEA
InterProcell wall modification
GO:0045490
IBA
IEA
Gene Ontologypectin catabolic process1
GO:0045488
IDA
Gene Ontologypectin metabolic process2
GO:0050829
IMP
Gene Ontologydefense response to Gram-negative bacterium3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030599
IEA
GOA Databasepectinesterase activity
GO:0030599
IDA
IBA
Gene Ontologypectinesterase activity1 2
GO:0030599
IEA
InterPropectinesterase activity
GO:0005515
IPI
Gene Ontologyprotein binding4
GO:0052689
IBA
Gene Ontologycarboxylic ester hydrolase activity1
GO:0045330
IEA
GOA Databaseaspartyl esterase activity
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000070 Pectinesterase, catalytic
IPR012334 Pectin lyase fold
IPR011050 Pectin lyase fold/virulence factor
Mapman id Description
21.3.1.2.1 Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase