Gene: TPR.G25235
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G25235
- Transcript Identifier TPR.T26095
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG2 : 390582-395080 : negative
Gene Family Information
- ID HOM05D000660
- #Genes/#Species 863/99
- Phylogenetic origin
- ID ORTHO05D000766
- #Genes/#Species 623/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA26095.v2
- id Tp57577_TGAC_v2_gene25235.v2
- pacid 35972174
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT5G09410 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT5G09410 |
| GO:0071275 | ISO | PLAZA Integrative Orthology | cellular response to aluminum ion | AT5G64220 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT5G09410 |
| GO:0050826 | ISO | PLAZA Integrative Orthology | response to freezing | AT5G09410 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT5G09410 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT5G09410 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003677 | ISO | PLAZA Homology (enrichment) | DNA binding | HOM05D000660 |
| GO:0005516 | ISO | PLAZA Integrative Orthology | calmodulin binding | AT5G09410 |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT5G64220 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G64220 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G09410 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000048 | IQ motif, EF-hand binding site |
| IPR020683 | Ankyrin repeat-containing domain |
| IPR002909 | IPT domain |
| IPR013783 | Immunoglobulin-like fold |
| IPR002110 | Ankyrin repeat |
| IPR036770 | Ankyrin repeat-containing domain superfamily |
| IPR014756 | Immunoglobulin E-set |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Mapman id | Description |
|---|---|
| 15.5.26 | RNA biosynthesis.transcriptional regulation.transcription factor (CAMTA) |