Gene: TPR.G21855

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G21855
  • Transcript Identifier TPR.T22606
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_1362 : 11698-17063 : negative

Gene Family Information

  • ID HOM05D001027
  • #Genes/#Species 591/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA22606.v2
  • id Tp57577_TGAC_v2_gene21855.v2
  • pacid 35953951
  • uniprot A0A2K3NEB9

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006334
IEA
GOA Databasenucleosome assembly
GO:0006334
IEA
InterPronucleosome assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0043047
ISO
PLAZA Integrative Orthologysingle-stranded telomeric DNA binding Zm00001eb357490
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G67580
GO:0042162
ISO
PLAZA Integrative Orthologytelomeric DNA binding AT5G67580
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G67580
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT5G67580
GO:0003691
IEA
GOA Databasedouble-stranded telomeric DNA binding
GO:0003691
IEA
InterProdouble-stranded telomeric DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT5G67580
GO:0000786
IEA
GOA Databasenucleosome
GO:0000786
IEA
InterPronucleosome
GO:0005634
IEA
GOA Databasenucleus
GO:0005694
IEA
GOA Databasechromosome
GO:0005730
IEA
GOA Databasenucleolus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR017930 Myb domain
IPR036390 Winged helix DNA-binding domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR009057 Homeobox-like domain superfamily
IPR005818 Linker histone H1/H5, domain H15
IPR044597 Single myb histone 1-6
Mapman id Description
12.3.3.2.1.2.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.associated protein factors.PRC2-recruiting factor (TRB)