Gene: TPR.G15976
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G15976
- Transcript Identifier TPR.T16521
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG4 : 21395115-21399965 : negative
Gene Family Information
- ID HOM05D000080
- #Genes/#Species 3730/98
- Phylogenetic origin
- ID ORTHO05D000053
- #Genes/#Species 2731/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA16521.v2
- id Tp57577_TGAC_v2_gene15976.v2
- pacid 35963365
- uniprot A0A2K3L452
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046274 | IEA | GOA Database | lignin catabolic process | |
| GO:0046274 | IEA | InterPro | lignin catabolic process | |
| GO:0009809 | ISO | PLAZA Integrative Orthology | lignin biosynthetic process | AT2G38080 |
| GO:0009807 | ISO | PLAZA Integrative Orthology | lignan biosynthetic process | Solyc06g076760.2 |
| GO:0009834 | ISO | PLAZA Integrative Orthology | plant-type secondary cell wall biogenesis | AT2G38080 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005507 | IEA | GOA Database | copper ion binding | |
| GO:0005507 | IEA | InterPro | copper ion binding | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0052716 | IEA | GOA Database | hydroquinone:oxygen oxidoreductase activity | |
| GO:0052716 | IEA | InterPro | hydroquinone:oxygen oxidoreductase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048046 | IEA | GOA Database | apoplast | |
| GO:0048046 | IEA | InterPro | apoplast | |
| GO:0005576 | IEA | GOA Database | extracellular region | |
| GO:0009505 | ISO | PLAZA Integrative Orthology | plant-type cell wall | AT5G01190 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011707 | Multicopper oxidase, N-termianl |
| IPR034285 | Laccase, second cupredoxin domain |
| IPR034288 | Laccase, first cupredoxin domain |
| IPR008972 | Cupredoxin |
| IPR011706 | Multicopper oxidase, C-terminal |
| IPR045087 | Multicopper oxidase |
| IPR017761 | Laccase |
| IPR001117 | Multicopper oxidase, type 1 |
| IPR034289 | Laccase, third cupredoxin domain |
| Mapman id | Description |
|---|---|
| 21.6.2.2 | Cell wall organisation.lignin.monolignol conjugation and polymerization.lignin laccase |