Gene: TPR.G13897
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G13897
- Transcript Identifier TPR.T14356
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_scaf_410 : 125409-130722 : negative
Gene Family Information
- ID HOM05D000070
- #Genes/#Species 3945/100
- Phylogenetic origin
- ID ORTHO05D003837
- #Genes/#Species 203/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA14356.v2
- id Tp57577_TGAC_v2_gene13897.v2
- pacid 35954356
- uniprot A0A2K3K8E6
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030163 | IEA | InterPro | protein catabolic process | |
| GO:1901800 | IEA | GOA Database | positive regulation of proteasomal protein catabolic process | |
| GO:0006508 | IEA | GOA Database | proteolysis | |
| GO:0006511 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent protein catabolic process | AT5G58290 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0036402 | IEA | GOA Database | proteasome-activating activity | |
| GO:0036402 | IEA | InterPro | proteasome-activating activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity | |
| GO:0008233 | IEA | GOA Database | peptidase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G58290 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G58290 |
| GO:0008540 | ISO | PLAZA Integrative Orthology | proteasome regulatory particle, base subcomplex | AT5G58290 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT5G58290 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G58290 |
| GO:0000502 | ISO | PLAZA Integrative Orthology | proteasome complex | AT5G58290 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005937 | 26S proteasome regulatory subunit P45-like |
| IPR041569 | AAA ATPase, AAA+ lid domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003959 | ATPase, AAA-type, core |
| IPR032501 | Proteasomal ATPase OB C-terminal domain |
| IPR035256 | 26S Proteasome regulatory subunit 6B |
| IPR003593 | AAA+ ATPase domain |
| Mapman id | Description |
|---|---|
| 19.2.5.2.1.3 | Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.ATPase components.regulatory component RPT3 |