Gene: THA.LOC104819796

General Information

Structural Information

  • Species Tarenaya hassleriana
  • Gene Identifier THA.LOC104819796
  • Transcript Identifier THA.XM_010550042.2
  • Gene Type Coding gene
  • Location NW_010966177.1 : 6668922-6673308 : negative

Gene Family Information

  • ID HOM05D001563
  • #Genes/#Species 409/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • GeneID 104819796
  • RefSeq XM_010550042.2
  • RefSeq XP_010548344.1
  • tid rna26103
  • id gene16913

Descriptions

  • Description splicing factor U2af large subunit A
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
InterPromRNA processing
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT4G36690

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
InterProRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G36690
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G36690

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G36690
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT4G36690

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR006529 U2 snRNP auxilliary factor, large subunit, splicing factor
Mapman id Description
16.2.1.2.11.2 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor heterodimer.large subunit U2AF2/U2AF65