Gene: Sp5g03860

General Information

Structural Information

Species Schrenkiella parvula
Gene Identifier Sp5g03860
Transcript Identifier Sp5g03860.1
Gene Type Coding gene
Location ch5-1 : 1375404-1377065 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000689
#Genes/#Species 831/16
Phylogenetic origin

ID ORTHO05D000015
#Genes/#Species 4708/79
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id Sp5g03860.v2.2
pacid 45076108

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR31639:SF6 - FBD DOMAIN-CONTAINING PROTEIN-RELATED

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000209	ISO	PLAZA Tree-based Orthology	protein polyubiquitination	AT3G42770
GO:0006952	ISO	PLAZA Tree-based Orthology	defense response	AT3G03040
GO:0016036	ISO	PLAZA Tree-based Orthology	cellular response to phosphate starvation	AT3G42770
GO:0009901	ISO	PLAZA Tree-based Orthology	anther dehiscence	AT3G62440

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0061630	ISO	PLAZA Tree-based Orthology	ubiquitin protein ligase activity	AT3G42770

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Tree-based Orthology	nucleus	AT4G27050
GO:0005737	ISO	PLAZA Tree-based Orthology	cytoplasm	AT4G27050
GO:0005783	ISO	PLAZA Tree-based Orthology	endoplasmic reticulum	AT1G47920
GO:0005773	ISO	PLAZA Tree-based Orthology	vacuole	AT5G25860
GO:0031225	ISO	PLAZA Tree-based Orthology	anchored component of membrane	AT3G58890

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001810	F-box domain
IPR013101	Leucine-rich repeat 2
IPR036047	F-box-like domain superfamily
IPR032675	Leucine-rich repeat domain superfamily

Mapman id	Description
35.1	not assigned.annotated