Gene: Sp4g24950
General Information
Structural Information
- Species Schrenkiella parvula
- Gene Identifier Sp4g24950
- Transcript Identifier Sp4g24950.1
- Gene Type Coding gene
- Location ch4-6 : 6525204-6528358 : positive
Gene Family Information
- ID HOM05D000042
- #Genes/#Species 4894/100
- Phylogenetic origin
- ID ORTHO05D000028
- #Genes/#Species 3637/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Sp4g24950.v2.2
- pacid 45084036
Descriptions
- Description PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0048440 | ISO | PLAZA Integrative Orthology | carpel development | AT2G42830 |
| GO:0010154 | ISO | PLAZA Integrative Orthology | fruit development | Solyc07g055920.4 |
| GO:0010622 | ISO | PLAZA Integrative Orthology | specification of ovule identity | Os12g0207000 |
| GO:0009835 | ISO | PLAZA Integrative Orthology | fruit ripening | Solyc07g055920.4 |
| GO:0048481 | ISO | PLAZA Integrative Orthology | plant ovule development | AT2G42830 |
| GO:0048283 | ISO | PLAZA Integrative Orthology | indeterminate inflorescence morphogenesis | Os12g0207000 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G42830 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT2G42830 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |