Gene: Sopen12g032060

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g032060
  • Transcript Identifier Sopen12g032060.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 81059922-81062765 : positive

Gene Family Information

  • ID HOM05D002267
  • #Genes/#Species 297/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g032060.1

Descriptions

  • Description tryptophan synthase beta type 2 (TSBtype2) | FUNCTIONS IN: pyridoxal phosphate binding, tryptophan synthase activity, catalytic activity | INVOLVED IN: tryptophan biosynthetic process, metabolic process | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit , Tryptophan synthase, beta chain-like | BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006568
IEA
InterProtryptophan metabolic process
GO:0000162
IEA
InterProtryptophan biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004834
IEA
InterProtryptophan synthase activity
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT5G38530
GO:0052684
ISO
PLAZA Integrative OrthologyL-serine hydro-lyase (adding indole, L-tryptophan-forming) activity AT5G38530
GO:0003824
ISO
PLAZA Homology (enrichment)catalytic activity HOM05D002267
GO:0046537
ISO
PLAZA Homology (enrichment)2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity HOM05D002267

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006654 Tryptophan synthase, beta chain
IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme
IPR006316 Tryptophan synthase, beta chain-like
IPR023026 Tryptophan synthase beta chain/beta chain-like
IPR001926 Pyridoxal-phosphate dependent enzyme
Mapman id Description
35.1 not assigned.annotated