Gene: Sopen12g030320

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g030320
  • Transcript Identifier Sopen12g030320.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 79580604-79582454 : negative

Gene Family Information

  • ID HOM05D000612
  • #Genes/#Species 928/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g030320.1

Descriptions

  • Description WLIM1 | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type | BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051017
ISO
PLAZA Integrative Orthologyactin filament bundle assembly AT1G10200
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc12g088320.2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051015
ISO
PLAZA Integrative Orthologyactin filament binding AT1G10200
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G10200

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015629
ISO
PLAZA Integrative Orthologyactin cytoskeleton AT1G10200
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G10200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001781 Zinc finger, LIM-type
Mapman id Description
15.5.39 RNA biosynthesis.transcriptional regulation.transcription factor (LIM)