Gene: Sopen12g028580
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen12g028580
- Transcript Identifier Sopen12g028580.1
- Gene Type Coding gene
- Location Spenn-ch12 : 77763350-77766031 : negative
Gene Family Information
- ID HOM05D002129
- #Genes/#Species 314/85
- Phylogenetic origin
- ID ORTHO05D002188
- #Genes/#Species 309/86
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen12g028580.1
Descriptions
- Description encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light. | COP1-interactive protein 1 (CIP1) | FUNCTIONS IN: protein binding | INVOLVED IN: regulation of protein import into nucleus | LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Prefoldin | BEST Arabidopsis thaliana protein match is: myosin heavy chain-related
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT1G64320 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003779 | IEA | InterPro | actin binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011684 | Protein Networked (NET), actin-binding (NAB) domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |