Gene: Sopen12g019210

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g019210
  • Transcript Identifier Sopen12g019210.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 50359062-50360801 : negative

Gene Family Information

  • ID HOM05D004303
  • #Genes/#Species 165/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g019210.1

Descriptions

  • Description Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | FUNCTIONS IN: RNA binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote , Ribosomal protein L7Ae/L8/Nhp2 family , Ribosomal protein L7Ae/L30e/S12e/Gadd45 | BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein .
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G08180

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IEA
InterPronucleolus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002415 H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote
IPR018492 Ribosomal protein L7Ae/L8/Nhp2 family
IPR029064 50S ribosomal protein L30e-like
IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45
Mapman id Description
16.2.1.3.4 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).protein factor (NHP2L1/SNU13)