Gene: Sopen12g014870

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g014870
  • Transcript Identifier Sopen12g014870.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 33710349-33714273 : negative

Gene Family Information

  • ID HOM05D003655
  • #Genes/#Species 188/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g014870.1

Descriptions

  • Description zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein | FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type , RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0046872
IEA
InterPrometal ion binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G27700

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000571 Zinc finger, CCCH-type
IPR045137 RNA-binding protein 26/27
Mapman id Description
35.1 not assigned.annotated