Gene: Sopen12g009600

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g009600
  • Transcript Identifier Sopen12g009600.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 11142628-11144823 : positive

Gene Family Information

  • ID HOM05D006740
  • #Genes/#Species 119/84
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g009600.1

Descriptions

  • Description Tetratricopeptide repeat (TPR)-like superfamily protein | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast thylakoid membrane | EXPRESSED DURING: seedling growth | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT2G37230

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G37230

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT2G37230
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT2G37230

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR033443 Pentacotripeptide-repeat region of PRORP
IPR002885 Pentatricopeptide repeat
Mapman id Description
35.1 not assigned.annotated