Gene: Sopen12g008200

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g008200
  • Transcript Identifier Sopen12g008200.2
  • Gene Type Coding gene
  • Location Spenn-ch12 : 7077067-7085434 : positive

Gene Family Information

  • ID HOM05D000936
  • #Genes/#Species 645/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g008200.2

Descriptions

  • Description ABC transporter family protein | FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances | INVOLVED IN: transport, transmembrane transport | LOCATED IN: chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core , ABC transporter, N-terminal , ABC transporter-like , ABC transporter, transmembrane domain, type 1 , ABC transporter integral membrane type 1 , ABC transporter, conserved site | BEST Arabidopsis thaliana protein match is: peroxisomal ABC transporter 1
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
InterProtransmembrane transport
GO:0006241
ISO
PLAZA Homology (enrichment)CTP biosynthetic process HOM05D000936
GO:0006221
ISO
PLAZA Homology (enrichment)pyrimidine nucleotide biosynthetic process HOM05D000936

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0140359
IEA
InterProABC-type transporter activity
GO:0003883
ISO
PLAZA Homology (enrichment)CTP synthase activity HOM05D000936

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
InterProintegral component of membrane
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G54350

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036640 ABC transporter type 1, transmembrane domain superfamily
IPR011527 ABC transporter type 1, transmembrane domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003439 ABC transporter-like, ATP-binding domain
IPR003593 AAA+ ATPase domain
Mapman id Description
24.1.3.1.3 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter