Gene: Sopen12g007700

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g007700
  • Transcript Identifier Sopen12g007700.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 6329462-6330199 : positive

Gene Family Information

  • ID HOM05D002836
  • #Genes/#Species 244/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g007700.1

Descriptions

  • Description embryo defective 1624 (emb1624) | FUNCTIONS IN: ribosome binding, translation initiation factor activity | INVOLVED IN: translational initiation, embryo development ending in seed dormancy | LOCATED IN: nucleolus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Translation initiation factor IF6 | BEST Arabidopsis thaliana protein match is: Translation initiation factor IF6
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042256
IEA
InterPromature ribosome assembly
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G55620
GO:0071215
ISO
PLAZA Integrative Orthologycellular response to abscisic acid stimulus AT3G55620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043022
IEA
InterProribosome binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G55620
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G55620
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G55620

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002769 Translation initiation factor IF6
Mapman id Description
17.1.2.2.3.8 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.ribosome assembly factor (eIF6)