Gene: Sopen12g006980

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g006980
  • Transcript Identifier Sopen12g006980.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 5458862-5466619 : negative

Gene Family Information

  • ID HOM05D000435
  • #Genes/#Species 1184/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g006980.1

Descriptions

  • Description ABC-2 type transporter family protein | FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances | LOCATED IN: membrane | EXPRESSED IN: petal, leaf whorl, sepal, flower, egg cell | EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core , ABC transporter-like , ABC-2 type transporter , ABC transporter, conserved site | BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010208
ISO
PLAZA Integrative Orthologypollen wall assembly AT4G27420
GO:0010588
ISO
PLAZA Integrative Orthologycotyledon vascular tissue pattern formation AT4G27420
GO:0010222
ISO
PLAZA Integrative Orthologystem vascular tissue pattern formation AT4G27420
GO:1901656
ISO
PLAZA Integrative Orthologyglycoside transport AT4G27420

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0140359
IEA
InterProABC-type transporter activity
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT4G27420
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G27420

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
InterPromembrane
GO:0070505
ISO
PLAZA Integrative Orthologypollen coat AT4G27420
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G27420

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR013525 ABC-2 type transporter
IPR003593 AAA+ ATPase domain
IPR003439 ABC transporter-like, ATP-binding domain
IPR043926 ABC transporter family G domain
Mapman id Description
24.1.3.2.2 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter