Gene: Sopen12g006110

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g006110
  • Transcript Identifier Sopen12g006110.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 4665002-4666414 : positive

Gene Family Information

  • ID HOM05D002453
  • #Genes/#Species 277/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g006110.1

Descriptions

  • Description encodes a member of the pentatricopeptide repeat (PPR) gene family. T-DNA insertion mutants had a complex phenotypic expression, ranging from embryo lethal to seedling lethal, to just subtle changes. | Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: rna processing factor 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT1G53330
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development AT1G53330
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G53330
GO:0048367
ISO
PLAZA Integrative Orthologyshoot system development AT1G53330

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
Mapman id Description
35.1 not assigned.annotated