Gene: AT1G53330
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G53330
- Transcript Identifier AT1G53330.2
- Gene Type Coding gene
- Location Chr1 : 19896339-19897442 : positive
Gene Family Information
- ID HOM05D002453
- #Genes/#Species 277/90
- Phylogenetic origin
- ID ORTHO05D008746
- #Genes/#Species 115/82
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G53330.2
- uniprot Q9MAG8
Descriptions
- Description Pentatricopeptide repeat (PPR) superfamily protein
- Computational description Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: rna processing factor 2 (TAIR:AT1G62670.1); Has 42827 Blast hits to 13568 proteins in 292 species: Archae - 4; Bacteria - 35; Metazoa - 401; Fungi - 615; Plants - 40434; Viruses - 0; Other Eukaryotes - 1338 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009793 | IMP | Gene Ontology | embryo development ending in seed dormancy | 1 |
| GO:0010154 | IMP | Gene Ontology | fruit development | 1 |
| GO:0048364 | IMP | Gene Ontology | root development | 1 |
| GO:0048367 | IMP | Gene Ontology | shoot system development | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISM | Gene Ontology | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |