Gene: Sopen12g002310
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen12g002310
- Transcript Identifier Sopen12g002310.1
- Gene Type Coding gene
- Location Spenn-ch12 : 966203-969655 : positive
Gene Family Information
- ID HOM05D000048
- #Genes/#Species 4563/100
- Phylogenetic origin
- ID ORTHO05D004674
- #Genes/#Species 174/72
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen12g002310.1
Descriptions
- Description Encodes a proton antiporter. Involved in the transportation of proanthocyanidin precursors into the vacuole. In vitro transport experiments showed that cyanidin-3-O-glucoside (anthocyanin) was an effective substrate, whereas the proanthocyanidin precursor epicatechin was not transported. However catechin-3-O-glucoside inhibited anthocyanin transport in a dose-dependent manner suggesting that glycosylated epicatechin is the in vivo substrate. Recessive mutation has strong reduction of proanthocyanidin deposition in vacuoles and has reduced dormancy. Expressed in the endothelium of ovules and developing seeds. | TRANSPARENT TESTA 12 (TT12) | CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE | BEST Arabidopsis thaliana protein match is: MATE efflux family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:1990961 | IEA | InterPro | xenobiotic detoxification by transmembrane export across the plasma membrane | |
GO:0055085 | IEA | InterPro | transmembrane transport | |
GO:0010231 | ISO | PLAZA Integrative Orthology | maintenance of seed dormancy | AT3G59030 |
GO:0010023 | ISO | PLAZA Integrative Orthology | proanthocyanidin biosynthetic process | AT3G59030 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0042910 | IEA | InterPro | xenobiotic transmembrane transporter activity | |
GO:0015297 | IEA | InterPro | antiporter activity | |
GO:0015299 | ISO | PLAZA Integrative Orthology | solute:proton antiporter activity | AT3G59030 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016020 | IEA | InterPro | membrane | |
GO:0009705 | ISO | PLAZA Integrative Orthology | plant-type vacuole membrane | AT3G59030 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
24.2.4.1.1 | Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX) |