Gene: Sopen12g001310

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g001310
  • Transcript Identifier Sopen12g001310.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 261132-262640 : positive

Gene Family Information

  • ID HOM05D001725
  • #Genes/#Species 375/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g001310.1

Descriptions

  • Description 60S ribosomal protein L8 (60S ribosomal protein L2) - Nicotiana tabacum (Common tobacco), Ribosomal protein L2 family | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, vacuole | EXPRESSED IN: guard cell, cultured cell | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold , Ribosomal protein L2 , Translation protein SH3-like , Nucleic acid-binding, OB-fold-like , Ribosomal protein L2, C-terminal , Ribosomal protein L2, domain 3 , Ribosomal Proteins L2, RNA binding domain , Ribosomal protein L2, conserved site | BEST Arabidopsis thaliana protein match is: Ribosomal protein L2 family
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G18020
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G36130

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT4G36130
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G18020
GO:0022625
ISO
PLAZA Integrative Orthologycytosolic large ribosomal subunit AT4G36130
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G18020
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT2G18020
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT4G36130
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G36130
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT4G36130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012340 Nucleic acid-binding, OB-fold
IPR002171 Ribosomal protein L2
IPR022666 Ribosomal Proteins L2, RNA binding domain
IPR022669 Ribosomal protein L2, C-terminal
IPR014726 Ribosomal protein L2, domain 3
IPR014722 Ribosomal protein L2, domain 2
IPR008991 Translation protein SH3-like domain superfamily
Mapman id Description
17.1.2.1.7 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL8