Gene: Sopen11g030720

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g030720
  • Transcript Identifier Sopen11g030720.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 66079190-66079684 : positive

Gene Family Information

  • ID HOM05D000174
  • #Genes/#Species 2155/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g030720.1

Descriptions

  • Description C2H2 and C2HC zinc fingers superfamily protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding | INVOLVED IN: response to chitin, regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: cotyledon, root, petiole | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045926
ISO
PLAZA Integrative Orthologynegative regulation of growth AT3G46090
GO:1902074
ISO
PLAZA Integrative Orthologyresponse to salt AT3G53600
GO:1902584
ISO
PLAZA Integrative Orthologypositive regulation of response to water deprivation AT3G53600
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT3G53600
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT3G53600
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT3G46090
GO:0009753
ISO
PLAZA Integrative Orthologyresponse to jasmonic acid AT3G53600
GO:0042631
ISO
PLAZA Integrative Orthologycellular response to water deprivation AT3G53600
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT3G53600
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT3G46090
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G53600
GO:2000022
ISO
PLAZA Integrative Orthologyregulation of jasmonic acid mediated signaling pathway AT3G53600
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT3G46090
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT3G53600

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G53600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036236 Zinc finger C2H2 superfamily
IPR013087 Zinc finger C2H2-type
Mapman id Description
15.5.15 RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)