Gene: Sopen11g029940

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g029940
  • Transcript Identifier Sopen11g029940.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 65333185-65333628 : negative

Gene Family Information

  • ID HOM05D000227
  • #Genes/#Species 1818/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g029940.1

Descriptions

  • Description Calcium-binding EF-hand family protein | FUNCTIONS IN: calcium ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane, nucleus, cytoplasm | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site , EF-HAND 2 , EF-hand-like domain , Calcium-binding EF-hand , EF-hand | BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G62820

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
InterProcalcium ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G12310
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G12310
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G12310
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G12310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011992 EF-hand domain pair
IPR002048 EF-hand domain
Mapman id Description
27.7.2 Multi-process regulation.calcium-dependent signalling.calcium sensor (CML)