Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen06g030220 ubiquitin-specific protease 13 (UBP13) | FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | LOCATED IN: cellular_component unknown | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: TRAF-like , Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site , MATH , Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 , TRAF-type | BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 12 ., Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 Spenn-ch06 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G8600 LG-5 + View
Acer truncatum Atru.chr3.3045 chr3 + View
Avicennia marina MSTRG.17666 ScioBoG_19834_HRSCAF_19925 + View
Aquilegia oxysepala Aqoxy1G00572 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8JQ024 K11838 - ubiquitin carboxyl-terminal hydrolase 7 (USP7, UBP15) arahy.Tifrunner.gnm1.Arahy.07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0KSV0I PTHR24006//PTHR24006:SF445 - FAMILY NOT NAMED // UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15 arahy.Tifrunner.gnm1.Arahy.17 + View
Amborella trichopoda ATR0697G188 AmTr_v1.0_scaffold00004 + View
Beta vulgaris EL10Ac7g16259 K11838 - ubiquitin carboxyl-terminal hydrolase 7 (USP7, UBP15) Chr7_EL10_PGA_scaffold5 + View
Camellia sinensis var. sinensis CSS0046580 PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 isoform X2 [Vitis vinifera] Chr13 + View
Camellia sinensis var. sinensis CSS0008338 PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 isoform X1 [Nelumbo nucifera] Chr11 - View
Capsicum annuum CAN.G1463.23 PGAv.1.6.scaffold1463 - View
Capsicum annuum CAN.G742.1 PGAv.1.6.scaffold742 + View
Cicer arietinum L. Ca_16268_v3 Ca_LG5_v3 + View
Corylus avellana Haze_23612 Similar to UBP13: Ubiquitin carboxyl-terminal hydrolase 13 (Arabidopsis thaliana OX%3D3702) 6 - View
Citrus clementina Ciclev10027709m.g scaffold_8 + View
Ceratophyllum demersum CDE07G0993 5 + View
Carpinus fangiana Cfa010225 Cfa04 - View
Carica papaya Cpa.g.sc103.36 supercontig_103 + View
Chenopodium quinoa AUR62001586 UBP12: Ubiquitin carboxyl-terminal hydrolase 12 C_Quinoa_Scaffold_2716 + View
Davidia involucrata Dinv25089 GWHABJS00000015 + View
Davidia involucrata Dinv32145 GWHABJS00000010 + View
Durio zibethinus Duzib150G0607 NW_019167882.1 - View
Durio zibethinus Duzib168G0467 NW_019168159.1 - View
Durio zibethinus Duzib170G0279 NW_019167871.1 + View
Eucalyptus grandis Eucgr.B03800 Chr02 - View
Erythranthe guttata Migut.N02429 scaffold_14 + View
Fragaria x ananassa FAN21G1895 K11838 - ubiquitin carboxyl-terminal hydrolase 7 (USP7, UBP15) Fvb3-2 - View
Fragaria x ananassa FAN16G2930 K11838 - ubiquitin carboxyl-terminal hydrolase 7 (USP7, UBP15) Fvb3-3 - View
Fragaria x ananassa FAN25G0247 K11838 - ubiquitin carboxyl-terminal hydrolase 7 (USP7, UBP15) Fvb3-1 + View
Fragaria x ananassa FAN11G0531 K11838 - ubiquitin carboxyl-terminal hydrolase 7 (USP7, UBP15) Fvb3-4 + View
Fragaria vesca FvH4_3g26930 K11838 - ubiquitin carboxyl-terminal hydrolase 7 (USP7, UBP15) Fvb3 - View
Gossypium hirsutum Gohir.A05G077000 K11838 - ubiquitin carboxyl-terminal hydrolase 7 (USP7, UBP15) A05 + View
Gossypium hirsutum Gohir.A07G114416 K11838 - ubiquitin carboxyl-terminal hydrolase 7 (USP7, UBP15) A07 - View
Gossypium hirsutum Gohir.D07G118100 K11838 - ubiquitin carboxyl-terminal hydrolase 7 (USP7, UBP15) D07 - View
Glycine max Glyma.14G044500 K11838 - ubiquitin carboxyl-terminal hydrolase 7 (USP7, UBP15) Gm14 - View
Gossypium raimondii Gorai.009G081400 Chr09 + View
Gossypium raimondii Gorai.001G127100 Chr01 - View
Hydrangea macrophylla Hma1.2p1_0218F.1_g092240 Hma1.2p1_0218F.1 - View
Lotus japonicus LjContig00564g0009059 K11838 - ubiquitin carboxyl-terminal hydrolase 7 (USP7, UBP15) Contig00564 + View
Magnolia biondii MBI11_g24569_MAGBIO AED:0.15 Chr11 - View
Malus domestica MD11G1177100 ubiquitin-specific protease 13 Chr11 - View
Malus domestica MD03G1161100 ubiquitin-specific protease 12 Chr03 - View
Manihot esculenta Manes.04G063600 Chromosome04 - View
Nelumbo nucifera Nn2g14445 chr2 - View
Oryza sativa ssp. japonica Os07g0163800 Similar to predicted protein. chr07 + View
Petunia axillaris Peaxi162Scf00259g00009 Ubiquitin carboxyl-terminal hydrolase 13 Peaxi162Scf00259 + View
Punica granatum PGR102G3339 NC_045129.1 + View
Prunus persica Prupe.6G149500 K11838 - ubiquitin carboxyl-terminal hydrolase 7 (USP7, UBP15) Pp06 - View
Pisum sativum Psat2g023840 ICP0-binding domain of Ubiquitin-specific protease 7 chr2LG1 + View
Papaver somniferum PSO339G5267 NC_039366.1 + View
Quercus lobata QL01p018861 1 + View
Rosa chinensis RcHm_v2.0_Chr5g0049371 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim01G0198200 chr01 + View
Striga asiatica SGA_v2.0_scaffold16G07531 scaffold16 - View
Simmondsia chinensis Sc21g0006650 GWHAASQ00000021 + View
Sapria himalayana SHI25286 scaffold48_4099315 - View
Solanum lycopersicum Solyc11g071700.2 ubiquitin carboxyl-terminal hydrolase 12 (AHRD V3.3 *** A0A2I4H4Q0_9ROSI) SL4.0ch11 + View
Solanum lycopersicum Solyc06g073820.3 Ubiquitin carboxyl-terminal hydrolase 12 (AHRD V3.3 *** A0A2G2XWY4_CAPAN) SL4.0ch06 + View
Solanum tuberosum PGSC0003DMG402003010 Ubiquitin carboxyl-terminal hydrolase ST4.03ch11 + View
Selenicereus undatus Hund20966 Scaffold_33673 - View
Selenicereus undatus Hund18816 Scaffold_33675 - View
Trochodendron aralioides TAR623G0805 group7 + View
Trochodendron aralioides TAR633G0382 group2 + View
Trochodendron aralioides TAR636G0839 group1 - View
Theobroma cacao Thecc.09G267500 Ubiquitin-specific protease 13 Chromosome_9 + View
Tarenaya hassleriana THA.LOC104810946 ubiquitin carboxyl-terminal hydrolase 12-like isoform X1 NW_010965304.1 - View
Tripterygium wilfordii TWI79G0935 NC_052238.1 - View
Vaccinium macrocarpon vmacro14303 Similar to UBP13: Ubiquitin carboxyl-terminal hydrolase 13 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View