Gene: Sopen11g029050
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g029050
- Transcript Identifier Sopen11g029050.1
- Gene Type Coding gene
- Location Spenn-ch11 : 64702734-64704257 : positive
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D009745
- #Genes/#Species 92/73
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen11g029050.1
Descriptions
- Description Encodes a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts. | pigment defective 247 (PDE247) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 21
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009451 | ISO | PLAZA Integrative Orthology | RNA modification | AT1G05750 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G05750 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.11.3.3.4.41 | RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (CLB19) |