Gene: AT1G05750

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G05750
  • Transcript Identifier AT1G05750.1
  • Gene Type Coding gene
  • Location Chr1 : 1721523-1723025 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G05750.1
  • symbol PDE247
  • Alias CLB19
  • full_name pigment defective 247
  • uniprot Q9MA50

Descriptions

  • Description Tetratricopeptide repeat (TPR)-like superfamily protein
  • Computational description pigment defective 247 (PDE247); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 21 (TAIR:AT2G20540.1); Has 41993 Blast hits to 13871 proteins in 254 species: Archae - 1; Bacteria - 18; Metazoa - 75; Fungi - 77; Plants - 41230; Viruses - 0; Other Eukaryotes - 592 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009451
IMP
IBA
Gene OntologyRNA modification1 2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0005515
IEA
InterProprotein binding
GO:0003723
IBA
Gene OntologyRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA
ISM
Gene Ontologychloroplast1
GO:0043231
IBA
Gene Ontologyintracellular membrane-bounded organelle2
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
Mapman id Description
16.11.3.3.4.41 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (CLB19)