Gene: Sopen11g028860

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g028860
  • Transcript Identifier Sopen11g028860.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 64531952-64537130 : positive

Gene Family Information

  • ID HOM05D000165
  • #Genes/#Species 2272/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g028860.1

Descriptions

  • Description Encodes an atypical pectin methylesterase that does not require salt for its activity and has a blockwise mode of pectin demethylesterification. | pectin methylesterase 31 (PME31) | FUNCTIONS IN: pectinesterase activity | INVOLVED IN: pectin metabolic process | LOCATED IN: cell wall, plant-type cell wall | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pectinesterase, active site , Pectin lyase fold/virulence factor , Pectinesterase, catalytic , Pectin lyase fold | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042545
IEA
InterProcell wall modification
GO:0050829
ISO
PLAZA Integrative Orthologydefense response to Gram-negative bacterium AT3G29090
GO:0045488
ISO
PLAZA Integrative Orthologypectin metabolic process AT3G29090

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030599
IEA
InterPropectinesterase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G29090

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000070 Pectinesterase, catalytic
IPR011050 Pectin lyase fold/virulence factor
IPR012334 Pectin lyase fold
Mapman id Description
21.3.1.2.1 Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase