Gene: Sopen11g025110
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g025110
- Transcript Identifier Sopen11g025110.1
- Gene Type Coding gene
- Location Spenn-ch11 : 60524652-60530998 : positive
Gene Family Information
- ID HOM05D000386
- #Genes/#Species 1270/100
- Phylogenetic origin
- ID ORTHO05D000406
- #Genes/#Species 976/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen11g025110.1
Descriptions
- Description ABC-2 type transporter family protein | FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances | INVOLVED IN: response to karrikin | LOCATED IN: membrane | EXPRESSED IN: 7 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core , ABC transporter-like , ABC-2 type transporter , ABC transporter, conserved site | BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0080167 | ISO | PLAZA Integrative Orthology | response to karrikin | AT3G21090 |
GO:0010025 | ISO | PLAZA Integrative Orthology | wax biosynthetic process | AT1G51500 |
GO:0140352 | ISO | PLAZA Integrative Orthology | export from cell | AT1G51500 |
GO:0051607 | ISO | PLAZA Integrative Orthology | defense response to virus | AT1G51500 |
GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT1G51500 |
GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT1G51500 |
GO:0055085 | ISO | PLAZA Integrative Orthology | transmembrane transport | AT1G51500 |
GO:0080172 | ISO | PLAZA Integrative Orthology | petal epidermis patterning | AT1G51460 |
GO:0080051 | ISO | PLAZA Integrative Orthology | cutin transport | AT1G51460 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G51500 |
GO:0015562 | ISO | PLAZA Integrative Orthology | efflux transmembrane transporter activity | AT1G51500 |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0140359 | IEA | InterPro | ABC-type transporter activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G51460 |
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G51500 |
GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT1G51500 |
GO:0016020 | IEA | InterPro | membrane |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
21.9.4.2 | Cell wall organisation.cutin and suberin.export.wax lipid exporter (CER5) |
24.1.3.2.2 | Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter |