Gene: Sopen11g009130

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g009130
  • Transcript Identifier Sopen11g009130.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 8812489-8816086 : negative

Gene Family Information

  • ID HOM05D005981
  • #Genes/#Species 131/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g009130.1

Descriptions

  • Description 5-3 exonuclease family protein | FUNCTIONS IN: 5-3 exonuclease activity, DNA binding, catalytic activity | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: 5, apos, -3, apos | exonuclease, SAM-fold domain , 5, apos, -3, apos | exonuclease, C-terminal subdomain , 5, apos, -3, apos | exonuclease, N-terminal resolvase-like domain | BEST Arabidopsis thaliana protein match is: 5-3 exonuclease family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006261
IEA
InterProDNA-dependent DNA replication

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003824
IEA
InterProcatalytic activity
GO:0003887
IEA
InterProDNA-directed DNA polymerase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal
IPR020045 DNA polymerase I-like, H3TH domain
IPR029060 PIN-like domain superfamily
IPR002421 5'-3' exonuclease
IPR002298 DNA polymerase A
IPR036279 5'-3' exonuclease, C-terminal domain superfamily
Mapman id Description
13.5.6.1 Cell cycle organisation.organellar DNA replication.RNA primer removal.plastidial RNA exonuclease