Gene: Sopen11g009090

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g009090
  • Transcript Identifier Sopen11g009090.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 8706862-8708403 : negative

Gene Family Information

  • ID HOM05D001566
  • #Genes/#Species 408/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g009090.1

Descriptions

  • Description Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H and Al3 rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity. | sensitive to proton rhizotoxicity 1 (STOP1) | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type , Zinc finger, double-stranded RNA binding | BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010044
IEA
InterProresponse to aluminum ion
GO:0010447
IEA
InterProresponse to acidic pH
GO:0071472
ISO
PLAZA Integrative Orthologycellular response to salt stress AT1G34370
GO:0071453
ISO
PLAZA Integrative Orthologycellular response to oxygen levels AT1G34370
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated Os12g0170400
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G34370
GO:0043620
ISO
PLAZA Integrative Orthologyregulation of DNA-templated transcription in response to stress Os12g0170400
GO:1900037
ISO
PLAZA Integrative Orthologyregulation of cellular response to hypoxia AT1G34370

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT1G34370
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G34370
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT1G34370
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT1G34370
GO:0140110
ISO
PLAZA Integrative Orthologytranscription regulator activity AT1G34370

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G34370

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036236 Zinc finger C2H2 superfamily
IPR013087 Zinc finger C2H2-type
IPR044300 Protein SENSITIVE TO PROTON RHIZOTOXICITY 1/2
Mapman id Description
15.5.15 RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)