Gene: Sopen11g008240
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g008240
- Transcript Identifier Sopen11g008240.1
- Gene Type Coding gene
- Location Spenn-ch11 : 7315725-7326009 : negative
Gene Family Information
- ID HOM05D004729
- #Genes/#Species 155/97
- Phylogenetic origin
- ID ORTHO05D005451
- #Genes/#Species 157/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen11g008240.1
Descriptions
- Description holocarboxylase synthetase 2 (HCS2) | FUNCTIONS IN: biotin-(acetyl-CoA-carboxylase) ligase activity, catalytic activity | INVOLVED IN: protein modification process | EXPRESSED IN: pedicel | EXPRESSED DURING: 4 anthesis | CONTAINS InterPro DOMAIN/s: Biotin protein ligase, C-terminal , Biotin/lipoate A/B protein ligase , Biotin--acetyl-CoA-carboxylase ligase | BEST Arabidopsis thaliana protein match is: holocarboxylase synthase 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006464 | IEA | InterPro | cellular protein modification process | |
GO:0042966 | ISO | PLAZA Integrative Orthology | biotin carboxyl carrier protein biosynthetic process | AT2G25710 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004077 | IEA | InterPro | biotin-[acetyl-CoA-carboxylase] ligase activity | |
GO:0018271 | ISO | PLAZA Integrative Orthology | biotin-protein ligase activity | AT1G37150 |
GO:0004078 | ISO | PLAZA Integrative Orthology | biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity | AT2G25710 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT2G25710 |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G25710 |
GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT2G25710 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
7.6.4 | Coenzyme metabolism.biotin biosynthesis.biotin:protein ligase |