Gene: Sopen11g008240

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g008240
  • Transcript Identifier Sopen11g008240.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 7315725-7326009 : negative

Gene Family Information

  • ID HOM05D004729
  • #Genes/#Species 155/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g008240.1

Descriptions

  • Description holocarboxylase synthetase 2 (HCS2) | FUNCTIONS IN: biotin-(acetyl-CoA-carboxylase) ligase activity, catalytic activity | INVOLVED IN: protein modification process | EXPRESSED IN: pedicel | EXPRESSED DURING: 4 anthesis | CONTAINS InterPro DOMAIN/s: Biotin protein ligase, C-terminal , Biotin/lipoate A/B protein ligase , Biotin--acetyl-CoA-carboxylase ligase | BEST Arabidopsis thaliana protein match is: holocarboxylase synthase 1
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006464
IEA
InterProcellular protein modification process
GO:0042966
ISO
PLAZA Integrative Orthologybiotin carboxyl carrier protein biosynthetic process AT2G25710

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004077
IEA
InterProbiotin-[acetyl-CoA-carboxylase] ligase activity
GO:0018271
ISO
PLAZA Integrative Orthologybiotin-protein ligase activity AT1G37150
GO:0004078
ISO
PLAZA Integrative Orthologybiotin-[methylcrotonoyl-CoA-carboxylase] ligase activity AT2G25710

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G25710
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G25710
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT2G25710

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003142 Biotin protein ligase, C-terminal
IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain
IPR004408 Biotin--acetyl-CoA-carboxylase ligase
Mapman id Description
7.6.4 Coenzyme metabolism.biotin biosynthesis.biotin:protein ligase